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Line Preservation

Mouse Cryopreservation Services

Since 1998, ingenious targeting laboratory has provided cryopreservation services to protect valuable genetically engineered mouse lines for researchers worldwide. Our cryopreservation expertise ensures your mouse models remain available for future research, protected against colony loss due to disease outbreak, breeding failure, or facility disruption.

Cryopreservation converts living mouse lines into stable frozen archives that can be stored indefinitely and recovered when needed. Whether preserving sperm for rapid archiving or embryos for maximum genetic preservation, cryopreservation provides insurance for your research investment and enables efficient management of mouse model resources.

2,500+
Projects Completed
800+
Publications
26+
Years Experience
100%
Success Rate

Cryopreservation Options

Sperm Cryopreservation

Sperm freezing provides rapid, cost effective line preservation:

  • Speed:Samples collected and frozen within days
  • Efficiency:Single male provides multiple preservation units
  • Cost:Lower cost than embryo cryopreservation
  • Recovery:IVF with wildtype oocytes regenerates line

Sperm cryopreservation is ideal for routine archiving of established lines and backup preservation of active breeding colonies.

Embryo Cryopreservation

Embryo freezing preserves complete genotypes including homozygotes and complex allele combinations:

  • Genetic preservation:Both maternal and paternal genotypes preserved
  • Homozygote recovery:Frozen embryos can be homozygous
  • Complex genotypes:Multi allele combinations preserved intact
  • Recovery:Direct embryo transfer regenerates line

Embryo cryopreservation is preferred when preserving homozygous lines, compound mutants, or genotypes that would be difficult to regenerate through breeding.

Choosing Between Methods

Sperm Cryopreservation

AdvantageConsideration
Rapid turnaroundRecovery requires IVF
Lower costOffspring are heterozygous
Minimal animal useFemale genotype from oocyte donor
Multiple units from one maleSome strains freeze less efficiently

Embryo Cryopreservation

AdvantageConsideration
Complete genotype preservationHigher cost than sperm
Homozygotes directly recoveredRequires more donor animals
Complex alleles preservedLonger preparation time
Higher recovery rates for some strainsEmbryo collection scheduling

Method Selection Guide

SituationRecommended Method
Routine backup of heterozygous lineSperm cryopreservation
Archiving homozygous lineEmbryo cryopreservation
Complex multi allele genotypeEmbryo cryopreservation
Rapid archiving neededSperm cryopreservation
Maximum genetic securityBoth sperm and embryo
Cost sensitive archivingSperm cryopreservation

Recovery Services

IVF Recovery (from Sperm)

In vitro fertilization regenerates lines from cryopreserved sperm:

  • Thaw cryopreserved sperm samples
  • Fertilize wildtype oocytes in vitro
  • Transfer resulting embryos to pseudopregnant recipients
  • Genotype offspring to identify carriers

IVF recovery typically produces heterozygous offspring that can be intercrossed to regenerate homozygotes if needed.

Embryo Transfer Recovery

Direct embryo transfer regenerates lines from cryopreserved embryos:

  • Thaw cryopreserved embryos
  • Transfer to pseudopregnant recipients
  • Pups born with preserved genotype
  • No additional breeding required for genotype recovery

Embryo transfer recovery is straightforward and regenerates the exact genotype that was frozen.

Why Cryopreserve

Protect Research Investment

Genetically engineered mouse models represent significant investment:

  • Time:Many months for model generation
  • Cost:Substantial project investment
  • Expertise:Scientific design and characterization
  • Irreplaceable:Unique alleles cannot be easily recreated

Cryopreservation protects this investment against unforeseen loss.

Risk Mitigation

Live colonies face multiple risks:

  • Disease outbreak:Pathogen introduction can require colony elimination
  • Breeding failure:Lines can become infertile or lose vigor
  • Facility disruption:Equipment failure, natural disaster, or relocation
  • Genetic drift:Accumulated mutations over many generations
  • Human error:Breeding mistakes or colony mismanagement

Frozen archives provide recovery options when live colonies are compromised.

Resource Efficiency

Cryopreservation enables efficient resource management:

  • Reduce vivarium costs:Archive inactive lines instead of maintaining live colonies
  • Free cage space:Preserve lines not currently needed for experiments
  • Maintain options:Keep valuable lines available without ongoing per diem costs
  • Share resources:Distribute frozen samples to collaborators

Storage and Security

Liquid Nitrogen Storage

Cryopreserved samples are maintained in liquid nitrogen at minus 196 degrees Celsius:

  • Samples remain viable indefinitely at this temperature
  • No biological activity or degradation occurs
  • Periodic liquid nitrogen replenishment maintains temperature
  • Automated monitoring systems alert to any issues

Redundant Storage

Critical samples benefit from geographic redundancy:

  • Store backup samples at separate location
  • Protection against site specific disasters
  • Multiple recovery options if primary archive is compromised

Inventory Management

Professional inventory tracking ensures sample accessibility:

  • Detailed records of all stored samples
  • Location tracking within storage system
  • Sample history and recovery documentation
  • Regular inventory audits

Integration with Model Generation

Archiving New Models

Cryopreservation integrates seamlessly with model generation projects:

  • Archive germline confirmed founders as part of project completion
  • Preserve characterized ES cell clones for future use
  • Create backup before shipping live animals
  • Establish archive before colony expansion

Ongoing Colony Support

Cryopreservation supports active research programs:

  • Periodic backup of valuable breeding lines
  • Archive before planned colony reduction
  • Preserve intermediate genotypes during complex breeding
  • Create distribution archives for collaborator requests
Learn about Colony Management Services

What Researchers Say

Our project manager did an outstanding job and has provided us with excellent customer service. Her availability to clarify issues has been nothing short of fantastic. I have recommended ingenious to others. Look forward for further collaboration on other projects.

Hamid M. Said, PhD, PharmD

University of California, Irvine

✦ New for 2026

Breeding Scheme Architect

Plan complex multi-allele breeding strategies, calculate expected genotype ratios, and estimate time to experimental cohorts—all before starting your project.

Visualize multi-generation breeding paths
Calculate Mendelian ratios automatically
Estimate timeline to study-ready cohorts

Free Research Tool

No account required

Allele 1Gene-flox (conditional)
Allele 2Cre-driver (tissue-specific)
TargetHomozygous knockout

→ 3 generations to target genotype

Protect Your Mouse Models

Our team is ready to discuss cryopreservation options for your mouse lines. Whether you need routine archiving of a single line or comprehensive preservation of a large model collection, we can design a preservation strategy that protects your research investment. Initial consultation is provided at no charge.

Frequently Asked Questions

Sperm cryopreservation freezes sperm from male mice. To recover the line, frozen sperm is used for IVF with wildtype oocytes. Embryo cryopreservation freezes two-cell embryos. Recovery involves thawing and transferring embryos to surrogate females. Sperm is faster and less expensive; embryos preserve maternal genetics and produce animals more quickly.

Samples stored in liquid nitrogen at -196°C remain viable indefinitely. There is no biological activity or degradation at this temperature. Properly stored samples have been successfully recovered after decades of storage.

For adequate insurance, we typically recommend archiving sperm from 2-3 males (yielding 10-20 straws) or 100-200 embryos. This provides multiple recovery attempts if needed. For particularly valuable lines, redundant storage at geographically separate locations is recommended.

Recovery timelines depend on the preservation method, recipient availability, and embryo/sperm quality. Embryo recovery is generally faster than sperm recovery via IVF. Contact us for current recovery timeline estimates based on your specific situation.

Yes. For lines with multiple alleles or complex genotypes, embryo cryopreservation is preferred because it preserves the exact genotype. Sperm cryopreservation only preserves the male genome and requires breeding to reconstruct complex genotypes.

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Cryopreservation Service Insights

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