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Mouse Model Strategies & Allele Types

Conditional Knockout (cKO) Mouse Models

A genetically engineered mouse in which a specific gene can be selectively inactivated in chosen tissues, cell types, or developmental stages—enabling precise studies of gene function while avoiding embryonic lethality or systemic effects.

Overview

While traditional knockout models are powerful tools for gene function analysis, they have a critical limitation: permanent gene deletion in all cells where the gene is active. Conditional knockout (cKO) models solve this problem by controlling when and where a gene is inactivated using site-specific recombinases.

How Conditional Knockouts Work

The most widely used system is Cre-lox recombination. A floxed allele is created with LoxP sites flanking an essential exon. When crossed with Cre-expressing mice, the gene is deleted only in tissues where Cre is active.

Advantages

Conditional knockouts avoid embryonic lethality, enable tissue-specific studies, allow temporal control of gene deletion, reduce confounding systemic effects, and better model diseases with tissue-restricted pathologies.

Frequently Asked Questions

What's the difference between a conditional and a constitutive knockout?

A constitutive knockout removes a gene in every cell throughout the organism's life. A conditional knockout removes the gene only in specific tissues or at specific developmental stages.

How is a conditional knockout triggered?

Conditional knockout is triggered by Cre recombinase expressed under a tissue-specific or inducible promoter, which excises the floxed exon in target cells.

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Related Terms

Cre-lox System

A bacteriophage P1-derived site-specific recombination technology that utilizes Cre recombinase to mediate genomic modifications at engineered LoxP sequences. This technology underpins conditional gene engineering approaches in mammalian genetics.

Floxed Gene / LoxP Site

A floxed gene contains two LoxP sites flanking an essential DNA segment, allowing Cre recombinase to mediate excision or inversion for conditional gene regulation. LoxP sites are 34 base pair sequences recognized by Cre recombinase.

Inducible Cre (Cre-ERT2 / Tamoxifen)

A system that fuses Cre recombinase to a modified estrogen-receptor ligand-binding domain (ERT2), confining it to the cytoplasm until activation by tamoxifen, thus providing temporal control of recombination.

Knockout (KO) Mouse Models

A genetically engineered mouse in which a specific gene has been permanently inactivated ('knocked out') to study its biological function, role in disease, and potential as a therapeutic target.

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Colony Management / BackcrossingView All TermsConventional (Constitutive) Knockout Mouse Models

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